Hi,
I echo what the other poster has said. Wait, wait and then wait some more. You want to be 100% sure that you will not have a delayed spike of ammonia or nitrite.
Perhaps you could get your LFS to do a test for you just to confirm as sometimes test kits can read a little inaccurate.
Which kit are you using to do your tests, and what are your ammonia readings?
The brown stuff that you are referring to is either cyno or diatoms, both are feeding of the breakdown of organic matter but will resolve themselves in due course.
What clean up crew (CUC) are you going for?
Regards
EDIT: Don't water change till you are 100% that the cycle is over, you will slow it down if you do.